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Bug #671

closed

Add more checks to appion testSuite.py

Added by Neil Voss over 14 years ago. Updated over 10 years ago.

Status:
Won't Fix or Won't Do
Priority:
Normal
Assignee:
Amber Herold
Category:
Python scripting
Start date:
06/16/2010
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.2.0
Show in known bugs:
No
Workaround:

Description

I (Neil) have written a test Suite that automatically tests several aspects of the pipeline, but it need more checks to make sure everything is going correctly.

see source:trunk/appion/test/testSuite.py


Related issues 1 (0 open1 closed)

Related to Appion - Feature #1007: Develop test scripts where possibleWon't Fix or Won't Do Amber Herold11/09/2010

Actions
Actions #1

Updated by Neil Voss over 14 years ago

  • Project changed from 5 to Appion
  • Affected Version set to Appion/Leginon 2.0.1
Actions #2

Updated by Neil Voss over 14 years ago

  • Category set to Python scripting
  • Status changed from New to Assigned
  • Assignee set to Amber Herold
  • Target version changed from Appion/Leginon 2.1.0 to Appion/Leginon 2.2.0
  • Affected Version changed from Appion/Leginon 2.0.1 to Appion/Leginon 2.0.0
Actions #3

Updated by Amber Herold about 14 years ago

  • Show in known bugs set to No
  • Deliverable set to Automated Testing
Actions #4

Updated by Amber Herold over 13 years ago

command to use:

python testSuite.py --runname=testrun1 --projectid=5 --rundir=/ami/data08/appion/10may13l35/testruns/testrun1 --expid=7622 --jobtype=testsuite --show-cmd --session=10may13l35

Actions #5

Updated by Amber Herold over 13 years ago

Used testSuite.py as the starting point for a new test framework in r15588. Info on creating a new test.
As a by-product, there is a general purpose basicReport.inc file that can be used for making very basic appion report web pages.

Still needs some polishing and review. I may want to add the config file changes to the setup wizard once everything has been reviewed.

Actions #6

Updated by Amber Herold over 13 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Amber Herold to Eric Hou

Eric, could you take a look at this so far? I can review in person as well if that is easier. It still needs a little work, but I'm hoping you can take a look at the overall structure to see if there are any major issues.
Thanks!

Actions #7

Updated by Eric Hou over 13 years ago

  • Assignee changed from Eric Hou to Amber Herold

Code is good.

There is a typo in basicreport.inc line 185.

When you are putting $dberror in the the exception and display it back to the webpage, you are exposing the database information to the world wide web.
This is a good example of we should put system error in the error log.
The most important exception needs to catch in BasicReport class is its constructor, because it try to establish mysql database connection.
So you can throw different types of exception, some for webpage, some for log file to solve this problem.
But in my knowledge, if everything setup correct, the web user shouldn't see any of the exception messages, because they shouldn't need to know what happen to the server side. (I never see any exception error messages when I am browsing any websites). For example: Database Error with Table: $tablename, finding $columnname entries like $pattern. DB error: $dberror (should not show this to the web).

Thanks.

Eric

Actions #8

Updated by Amber Herold over 13 years ago

TODO:
  1. merge this table display code with the existing one
  2. consider using runAppionScriptInSubprocess which was recently added to AppionScript
Actions #9

Updated by Amber Herold over 12 years ago

  • Target version changed from Appion/Leginon 2.2.0 to Appion/Leginon 3.0.0
Actions #10

Updated by Amber Herold almost 11 years ago

  • Target version changed from Appion/Leginon 3.0.0 to Appion/Leginon Future Version
Actions #11

Updated by Amber Herold over 10 years ago

  • Status changed from In Code Review to Won't Fix or Won't Do
  • Affected Version changed from Appion/Leginon 2.0.0 to Appion/Leginon 2.2.0
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