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Bug #967

open

embfactor64.exe missing in Appion?

Added by Dmitry Lyumkis about 14 years ago. Updated almost 14 years ago.

Status:
New
Priority:
Normal
Assignee:
Christopher Irving
Category:
-
Target version:
-
Start date:
10/25/2010
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.0.2
Show in known bugs:
No
Workaround:

Description

I got a warning when I tried to run post-processing, saying that there is no embfactor64.exe.

It's located in /ami/sw/bin, but that wasn't in my appion path. It's also not in the wrapper /ami/sw/bin/appion.

This program should be in the main Appion bin directory, like ace2.exe, since it's an executable (i.e. /myami/appion/bin/embfactor64.exe

Actions #1

Updated by Christopher Irving about 14 years ago

It's not in the Main appion bin directory because it's not there in the source distribution like ace2 and findem. It looks like Neil installed it in /ami/sw/bin. So where is it supposed to go? Is it something that we can place in the appion bin directory and freely redistribute or, is it a supporting application that needs to be downloaded separately?

Actions #2

Updated by Neil Voss about 14 years ago

You download it as a binary from here:

http://sites.google.com/site/3demimageprocessing/embfactor

I would rather add it to the install guide rather than putting a binary in subversion.

Actions #3

Updated by Dmitry Lyumkis almost 14 years ago

guppy does not access /ami/sw/bin, and the program is not running when I launch it from the web. I can only run it on the boxes. Where is it on Guppy?

This should go into the documentation for setting up the path variables to these types of programs

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