Appion Manual » History » Version 14
Amber Herold, 04/22/2010 12:41 PM
1 | 1 | Amber Herold | h1. Appion Manual |
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3 | 7 | Amber Herold | |
4 | 1 | Amber Herold | # [[An Introduction to Appion]] |
5 | 9 | Amber Herold | ## [[What is Appion?]] |
6 | ## [[System Requirements]] |
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7 | ## [[Authors]] |
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8 | 8 | Amber Herold | # [[Complete Installation]] |
9 | 9 | Amber Herold | ## [[Instructions for installing CentOS on your computer]] |
10 | ## [[Download additional Software]] |
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11 | ## [[Database Server Installation]] |
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12 | ## [[Processing Server Installation]] |
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13 | 14 | Amber Herold | ### [[Install supporting packages]] |
14 | ### [[Download Appion Files]] |
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15 | ### [[Perform system check]] |
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16 | ### [[Install Appion Packages]] |
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17 | ### [[Configure leginon.cfg]] |
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18 | ### [[Explanation of Sample Names]] |
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19 | ### [[Configure sinedon.cfg]] |
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20 | ### [[Install External Packages]] |
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21 | ### [[Compile FindEM]] |
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22 | ### [[Compile Ace2]] |
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23 | ### [[Compile Radermacher]] |
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24 | ### [[Install Xmipp]] |
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25 | ### [[Test Appion]] |
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26 | 9 | Amber Herold | ## [[Web Server Installation]] |
27 | ## [[Create a Test Project]] |
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28 | ## [[Setup Remote Processing]] |
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29 | 13 | Amber Herold | # [[Upgrade Instructions]] |
30 | 8 | Amber Herold | # [[Appion User Guide]] |
31 | 10 | Amber Herold | ## [[Appion and Leginon Database Tools]] |
32 | 12 | Amber Herold | ### [[Administration]] |
33 | ### [[User Management]] |
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34 | ### [[Project DB]] |
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35 | ### [[Image Viewers]] |
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36 | ### [[LOI - Leginon Observer Interface]] |
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37 | ### [[RCT]] |
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38 | ### [[Tomography]] |
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39 | ### [[Hole Template Viewer]] |
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40 | 11 | Amber Herold | ## [[Appion Processing]] |
41 | 12 | Amber Herold | ### [[Terminology]] |
42 | ### [[Common Workflow]] |
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43 | ### [[Processing Cluster Login]] |
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44 | ### [[Particle Selection]] |
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45 | ### [[CTF Estimation]] |
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46 | ### [[Import Tools]] |
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47 | ### [[Image Assessment]] |
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48 | 8 | Amber Herold | ### [[Region Mask Creation]] |