Common Features¶

The following 4 Image Viewer applications are available in Appion and Leginon web tools:

1. Image Viewer
2. 2 Way Viewer
3. 3 Way Viewer
4. Dual Viewer

These viewers allow you to:

1. View the mrc images associated with Projects and Sessions
2. Adjust image properties
3. Mark images as hidden or exemplar
4. View a sideshow of the images in a session
5. Download individual images in mrc, tiff or jpeg format
6. View a detailed image report including mrc header information and calibrations
7. View the Fourier Transform of the image
8. View ACE graphs
9. View Particle Picks
10. View Leginon MSI focus and acquisition targets
11. Overlay a scale ruler
12. View an aggregate summary of all the images in a session
13. Launch the Appion Image processing application
14. Launch a tool to create jpegs of all or many of the images in a session

All Image viewers have the following features:

• Summary Button

  Display a summary of the currently selected session (experiment).

• Processing Button

  Launch the Appion Image Processing Pipeline.

• Make jpgs Button

  Create jpeg images of the currently selected session.

• Project Drop Down List

  Projects that you own or have been shared will appear in the list. Select one to view.

• Session Drop Down List

  Sessions that belong to the currently selected Project will appear in the list. Select one to view.

• Image List

  The images belonging to the currently selected Session will appear in the Image List. The selected image will appear in the Image View. The total number of images is displayed at the top of the list.

• Image View

  The selected image will be displayed in the Image View. The Image View may be configured using the Image Tools controls located directly above the Image View.

• Image Tools

  Includes many basic image manipulation features such as filtering and Fourier Transform. Read the Image Tools manual page for more information.

The Following image viewers are available from the Appion and Leginon Tools start page:

1. Image Viewer
2. 2 Way Viewer
3. 3 Way Viewer
4. Dual Viewer

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Image Tools >

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