Index by date
04/12/2024
09/07/2022
08/17/2022
08/11/2022
06/04/2021
02/19/2020
11/26/2019
- 2 Way Viewer Shared
- Ab Initio Reconstruction
- Alignment SubStacks
- Align and Edit Tilt Pairs
- Align tilt series
- Auto Align Tilt Pairs
- Center Particles
- Combine Stacks
- Convert Stack into Particle Picks
- Create full tomogram
- Create Substack
- Create tomogram subvolume
- Direct Detector Frame Processing
- Ed's Iteration Alignment
- EMAN Common Lines
- EMAN Refinement
- Filter by MeanStdev
- Frealign Refinement
- Hierarchical or K-means Clustering
- IMAGIC Multi Reference Alignment
- Install phpMyAdmin shared
- Install SSH module for PHP shared
- More Stack Tools
- OTR Volume
- PDB to Model
- Quality Assessment
- Random Conical Tilt Picking
- RCT Volume
- Refine Reconstruction
- Repeat from other session
- Run Alignment
- Run Feature Analysis
- Run Particle Clustering
- Sort Junk
- Spider Coran Classification
- Spider Reference-based Alignment
- Spider Reference-free Alignment
- SPIDER Refinement
- Stacks
- Stack Creation
- Step by Step Guide
- Synthetic Data
- Synthetic Dataset Creation
- Tomography Tool
- Upload full tomogram
- Upload Refinement
- View Stacks
- Xmipp Kerden Self-Organizing Map
- Xmipp Maximum Likelihood Alignment
- Xmipp Reference-based Maximum Likelihood Alignment
- Xmipp Rotational Kerden Self-Organizing Map
11/25/2019
- Administration Tools Guide
- Common Features
- Common Workflow
- Create New Project
- Edit Project Description
- Edit Project Owners
- Groups
- Hole Template Viewer
- Image Assessment
- Manual Masking
- Multi Img Assessment
- Particle Alignment
- Particle Selection
- Processing Cluster Login
- RCT viewer
- Region Mask Creation
- Run Image Rejector
- Template Picking
- Terminology
- Tomography
- Unlink a Project Processing Database
- Upload Images to a new Project Session
- Users
- View a Summary of a Project Session
- View Projects
- Web Img Assessment
11/15/2019
04/15/2019
04/03/2019
03/26/2019
03/06/2019
12/13/2018
09/14/2018
08/15/2018
07/18/2018
07/13/2018
04/06/2018
02/19/2018
02/02/2018
01/31/2018
- Appion and Leginon Database Tools
- Enable User Authentication
- Install Appion Packages
- Install dosefgpu driftcorr
- Install dosefgpu driftcorr shared
- Install EMAN
- Install External Packages
- Install Grigorieff lab software
- Install MotionCor2
- Install Protomo
- Minor release update
- New User Registration
- Upgrade Instructions
- User Management
- Version 32 Change Log
01/25/2018
- Complete Installation
- Installing Appion with an existing Leginon installation
- Install Protomo2
- Package executable alias name in Appion
01/23/2018
12/19/2017
12/06/2017
11/15/2017
08/21/2017
07/06/2017
03/05/2017
10/31/2016
- Download additional Software (CentOS Specific)
- Extra supporting package table
- New support package requirement for 33
- Upgrade From 30 or above
10/27/2016
10/26/2016
07/27/2016
- Currrent myami release
- Developers guide
- Perform System Check Shared
- Test Appion Shared
- Web Server Installation on CentOS 6
05/25/2016
05/23/2016
12/05/2015
11/12/2015
10/22/2015
10/21/2015
09/02/2015
08/28/2015
06/15/2015
05/26/2015
05/12/2015
01/18/2015
11/19/2014
10/08/2014
09/29/2014
08/12/2014
08/06/2014
07/21/2014
06/19/2014
06/04/2014
04/04/2014
03/26/2014
03/05/2014
03/03/2014
02/10/2014
02/06/2014
02/03/2014
01/15/2014
01/08/2014
12/18/2013
- Additional Database Server Setup after Web Server Installation
- Download Appion and Leginon Files
- Setup Remote Processing
- Web Server Installation
12/17/2013
12/16/2013
- Configure Operating System
- Configure phpini
- Differences between Linux flavors
- Install Apache Web Server
- Install EPEL shared
- Install Redux image server
- Install SSH module for PHP webserver
- Install the Web Interface
- Install the Web Interface Advanced
- Start NFS
12/02/2013
11/25/2013
11/20/2013
10/30/2013
10/23/2013
09/10/2013
09/05/2013
06/25/2013
06/10/2013
05/29/2013
05/22/2013
05/14/2013
02/22/2013
09/20/2012
09/17/2012
09/14/2012
09/10/2012
09/07/2012
09/05/2012
08/24/2012
08/15/2012
08/07/2012
06/06/2012
06/04/2012
05/30/2012
05/08/2012
05/07/2012
05/03/2012
04/25/2012
04/19/2012
04/05/2012
03/26/2012
01/18/2012
10/12/2011
09/21/2011
09/06/2011
08/10/2011
08/08/2011
08/07/2011
08/02/2011
- Adding refine python parts
- Code Standards
- Common variables used
- Example config file
- Setup Local Databases
- Test datasets at AMI
07/27/2011
06/22/2011
05/31/2011
05/09/2011
05/03/2011
04/27/2011
04/26/2011
03/28/2011
03/11/2011
03/04/2011
03/02/2011
01/30/2011
01/27/2011
01/19/2011
12/22/2010
12/13/2010
12/10/2010
11/10/2010
11/08/2010
11/02/2010
10/29/2010
10/22/2010
10/21/2010
10/20/2010
10/12/2010
10/01/2010
09/28/2010
09/14/2010
08/19/2010
08/17/2010
08/11/2010
08/02/2010
07/29/2010
07/27/2010
07/23/2010
- Create a Project Processing Database
- Instruments
- Logout
- Modify Your Profile
- Project DB
- Retrieve Forgotten Password
- Share a Project Session with another User
07/22/2010
07/19/2010
07/15/2010
07/08/2010
07/06/2010
06/29/2010
06/23/2010
06/15/2010
06/14/2010
06/11/2010
06/10/2010
06/09/2010
- 2010 ADWAdd a new option to a program
- 2010 ADWOrganization of the PHP programs
- 2010 ADWOrganization of the Python programs
06/08/2010
06/07/2010
06/04/2010
06/03/2010
05/28/2010
05/27/2010
05/25/2010
05/21/2010
05/17/2010
05/11/2010
05/04/2010
04/16/2010
04/06/2010
03/19/2010
03/09/2010
03/04/2010
02/05/2010
02/03/2010
01/27/2010
01/14/2010
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