Common Features » History » Version 5
Amber Herold, 07/26/2010 02:18 PM
| 1 | 1 | Amber Herold | h1. Common Features |
|---|---|---|---|
| 2 | |||
| 3 | 2 | Amber Herold | The following 4 Image Viewer applications are available in Appion and Leginon web tools: |
| 4 | 5 | Amber Herold | # [[Image Viewer]] - provides a single image pane |
| 5 | # [[2 Way Viewer]] - provides 2 image panes for viewing the same mrc file in different ways side by side |
||
| 6 | # [[3 Way Viewer]] - provides 3 image panes for viewing the same mrc file in different ways |
||
| 7 | # [[Dual Viewer]] - provides 2 image panes for viewing separate mrc images side by side |
||
| 8 | 1 | Amber Herold | |
| 9 | 2 | Amber Herold | These viewers allow you to: |
| 10 | 5 | Amber Herold | # View an aggregate summary of all the images in a session |
| 11 | # Launch the Appion Image processing application |
||
| 12 | # Launch a tool to create jpegs of all or many of the images in a session |
||
| 13 | 2 | Amber Herold | # View the mrc images associated with Projects and Sessions |
| 14 | # Adjust image properties |
||
| 15 | # Mark images as _hidden_ or _exemplar_ |
||
| 16 | # View a sideshow of the images in a session |
||
| 17 | # Download individual images in mrc, tiff or jpeg format |
||
| 18 | # View a detailed image report including mrc header information and calibrations |
||
| 19 | # View the Fourier Transform of the image |
||
| 20 | # View ACE graphs |
||
| 21 | # View Particle Picks |
||
| 22 | # View Leginon MSI focus and acquisition targets |
||
| 23 | # Overlay a scale ruler |
||
| 24 | |||
| 25 | 1 | Amber Herold | All Image viewers have the following features: |
| 26 | |||
| 27 | |||
| 28 | * Summary Button |
||
| 29 | |||
| 30 | Display a summary of the currently selected session (experiment). |
||
| 31 | |||
| 32 | * Processing Button |
||
| 33 | |||
| 34 | Launch the Appion Image Processing Pipeline. |
||
| 35 | |||
| 36 | * Make jpgs Button |
||
| 37 | |||
| 38 | Create jpeg images of the currently selected session. |
||
| 39 | |||
| 40 | * Project Drop Down List |
||
| 41 | |||
| 42 | Projects that you own or have been shared will appear in the list. Select one to view. |
||
| 43 | |||
| 44 | * Session Drop Down List |
||
| 45 | |||
| 46 | Sessions that belong to the currently selected Project will appear in the list. Select one to view. |
||
| 47 | |||
| 48 | * Image List |
||
| 49 | |||
| 50 | The images belonging to the currently selected Session will appear in the Image List. The selected image will appear in the Image View. The total number of images is displayed at the top of the list. |
||
| 51 | |||
| 52 | * Image View |
||
| 53 | |||
| 54 | The selected image will be displayed in the Image View. The Image View may be configured using the Image Tools controls located directly above the Image View. |
||
| 55 | |||
| 56 | * Image Tools |
||
| 57 | |||
| 58 | Includes many basic image manipulation features such as filtering and Fourier Transform. Read the [[Image Tools]] manual page for more information. |
||
| 59 | |||
| 60 | !ImageViewerScreenMarked.jpg! |
||
| 61 | |||
| 62 | |||
| 63 | ______ |
||
| 64 | |||
| 65 | [[Image Tools|Image Tools >]] |
||
| 66 | |||
| 67 | ______ |