Free-hand test within Appion¶

These scripts originally came from John Rubinstein at University of Toronto and have been incorporated into Appion by Michael Cianfrocco with John's permission. Please get in touch with John for specific questions regarding issues related to compiling or the execution of these scripts.

• Information for compiling fast free-hand test.

• Example for running free-hand test

/home/acheng/michaelappion uploadstack.py --session=12aug15x --file=/home/acheng/myami/test_freeHand/stack00_dc4_sel.img --apix=6.02 --diam=380 --description="UNtilted stack" --commit --normalize --not-ctf-corrected --rundir=/ami/data00/appion/12aug15x/stacks/stack4 --runname=stack4 --projectid=371 --expid=10286 --jobtype=uploadstack --synctype=tilt --syncstack=2