Install dosefgpu driftcorr for GPU frame alignment (3.2)¶

For a gpu computer used for frame alignment, it is easiest to install CUDA at the version that also works with other GPU programs

Appion knows this program as dosefgpu_driftcorr, you may need to link to it.

Testing:
type

dosefgpu_driftcorr

should give help menu

Test run¶

If myami is installed, you can run the following script to create a small framestack and run the program.

Install motioncor2 for myami-beta or trunk installation¶

For a gpu computer used for frame alignment using MotionCor2, install LINUX: CUDA 8.0 Production Release (RHEL 6.x 64bit).
Then Download from http://msg.ucsf.edu/em/software/motioncor2.html and follow its installation instruction.

Make a soft link to /usr/local/bin as motioncor2 so that Appion script can find it.

ln -s your_installation_MotionCor2 /usr/local/bin/motioncor2

Testing:
type

motioncor2

should give help menu

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