Project

General

Profile

Upload Stack » History » Revision 4

Revision 3 (Anke Mulder, 07/08/2010 05:50 PM) → Revision 4/5 (Lauren Fisher, 10/15/2010 04:46 PM)

h1. Upload Stack 


 The user is able to upload particle stack to be used within Appion processing.  

 h2. General Workflow: 

 *To launch:*  

 # The user starts from the session to which the stack will be added  
 # The user provides the full path and name of the stack (e.g. /home/abc/start.hed) 
 # The user provides a brief description for the stack 
 # The user inputs the particle diameter in Angstrom 
 # The user inputs the pixel size for the model 
 # The user checks if the stack is CTF corrected (default: unchecked) 
 # The user checks if the particles will be normalized (default: checked) 
 # The user checks if the stack is committed to the database (default: checked) 

 *Output:* 

 # Once the stack is uploaded, it will appear under "stacks". 
 # The stack will be available for subsequent processing. 

 h2. Notes, Comments, and Suggestions: 

 # Stack must be in IMAGIC format (.hed or .img) 

 !http://emg.nysbc.org/attachments/277/Picture_81.png! 
 ______ 

 [[Upload More Images|< Upload More Images]] | [[Image Assessment|Image Assessment >]] 

 ______