FEI Talos installation specifics » History » Version 11
Anchi Cheng, 01/09/2016 11:01 PM
1 | 1 | Anchi Cheng | h1. FEI Talos installation specifics |
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3 | 7 | Anchi Cheng | h2. Install win32 version of python subpackages |
4 | 1 | Anchi Cheng | |
5 | Because all interaction with the scope uses COM interface that is only accessible through 32-bit architecture, python running Leginon component is the 32-bit version. Use the 32-bit Windows files (those marked as win32 and certainly not the ones says 64) in http://emg.nysbc.org/projects/leginon/files for these. |
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7 | 11 | Anchi Cheng | *Talos has a 64-bit Python pre-installed unde default python location C:\Python27. Therefore, we need to name our installation with another name, such as C:\Python27-win32.* |
8 | 1 | Anchi Cheng | |
9 | Here is the full list |
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10 | {{include(Windows_32_External_Package_Installers_Common)}} |
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11 | {{include(Comtypes_installer)}} |
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12 | 7 | Anchi Cheng | |
13 | 11 | Anchi Cheng | h2. Important: Install Python under a custom named folder |
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15 | *Talos has a 64-bit Python pre-installed unde default python location C:\Python27. Therefore, we need to name our installation with another name, such as C:\Python27-win32.* |
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16 | This is set during python installation. |
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17 | 7 | Anchi Cheng | |
18 | 1 | Anchi Cheng | The rest of the installation is similar to other FEI systems. |
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20 | h2. (Strongly recommended) Use local myami folder to run Leginon |
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22 | 10 | Anchi Cheng | Because we install into FEI's framework folder, it may be erased at the next upgrade by the service engineer. To reduce the possibility of loss of local modification, we recommend using local myami checked out from NRAMM svn repository directly as follows, rather than installed into python's site packages. |
23 | 7 | Anchi Cheng | |
24 | {{include(Set_pythonpath_environment_variable_for_local_myami_sandbox)}} |
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25 | 5 | Anchi Cheng | |
26 | h2. instruments.cfg |
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28 | cs is *constant for sperical abberation* |
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30 | For Tecnai series: |
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31 | <pre> |
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32 | [TEM] |
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33 | class: tecnai.Talos |
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34 | cs: 2.7e-3 |
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35 | </pre> |
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37 | h2. Testing with pyscope |
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39 | In python command |
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40 | <pre> |
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41 | from pyscope import tecnai |
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42 | t = tecnai.Talos() |
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43 | t.getMagnification() |
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44 | </pre> |
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45 | 6 | Anchi Cheng | |
46 | h2. Trouble Shooting |
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48 | [[unable to initializ Tecnai interface error]] |
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50 | h2. Programs to open before Leginon Client: None |