FEI Talos installation specifics » History » Version 16
Anchi Cheng, 01/29/2018 05:05 PM
1 | 16 | Anchi Cheng | h1. FEI Talos/Arctica installation specifics |
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2 | 1 | Anchi Cheng | |
3 | 7 | Anchi Cheng | h2. Install win32 version of python subpackages |
4 | 1 | Anchi Cheng | |
5 | Because all interaction with the scope uses COM interface that is only accessible through 32-bit architecture, python running Leginon component is the 32-bit version. Use the 32-bit Windows files (those marked as win32 and certainly not the ones says 64) in http://emg.nysbc.org/projects/leginon/files for these. |
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7 | Here is the full list |
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8 | {{include(Windows_32_External_Package_Installers_Common)}} |
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9 | {{include(Comtypes_installer)}} |
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10 | 7 | Anchi Cheng | |
11 | 1 | Anchi Cheng | h2. Important: Install Python under a custom named folder |
12 | 11 | Anchi Cheng | |
13 | 16 | Anchi Cheng | *If your Talos/Arctica has a 64-bit Python pre-installed unde default python location C:\Python27, we need to name our installation with another name, such as C:\Python27-win32.* |
14 | 11 | Anchi Cheng | This is set during python installation. |
15 | 7 | Anchi Cheng | |
16 | 1 | Anchi Cheng | The rest of the installation is similar to other FEI systems. |
17 | 7 | Anchi Cheng | |
18 | 5 | Anchi Cheng | h2. instruments.cfg |
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20 | cs is *constant for sperical abberation* |
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22 | 13 | Anchi Cheng | For Talos series: |
23 | 5 | Anchi Cheng | <pre> |
24 | [TEM] |
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25 | 13 | Anchi Cheng | class: fei.Talos |
26 | 5 | Anchi Cheng | cs: 2.7e-3 |
27 | 1 | Anchi Cheng | </pre> |
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29 | 16 | Anchi Cheng | For Arctica series: |
30 | <pre> |
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31 | [TEM] |
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32 | class: fei.Arctica |
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33 | cs: 2.7e-3 |
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34 | </pre> |
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37 | 5 | Anchi Cheng | h2. Testing with pyscope |
38 | 1 | Anchi Cheng | |
39 | In python command |
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40 | 16 | Anchi Cheng | |
41 | For Talos: |
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42 | 5 | Anchi Cheng | <pre> |
43 | 14 | Anchi Cheng | from pyscope import fei |
44 | t = fei.Talos() |
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45 | 1 | Anchi Cheng | t.getMagnification() |
46 | </pre> |
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47 | 16 | Anchi Cheng | |
48 | For Arctica: |
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49 | <pre> |
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50 | from pyscope import fei |
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51 | t = fei.Talos() |
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52 | t.getMagnification() |
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53 | </pre> |
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54 | |||
55 | 6 | Anchi Cheng | |
56 | h2. Trouble Shooting |
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57 | |||
58 | [[unable to initializ Tecnai interface error]] |
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60 | h2. Programs to open before Leginon Client: None |