FEI Talos installation specifics » History » Version 17
Anchi Cheng, 01/29/2018 05:08 PM
1 | 16 | Anchi Cheng | h1. FEI Talos/Arctica installation specifics |
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2 | 1 | Anchi Cheng | |
3 | 7 | Anchi Cheng | h2. Install win32 version of python subpackages |
4 | 1 | Anchi Cheng | |
5 | Because all interaction with the scope uses COM interface that is only accessible through 32-bit architecture, python running Leginon component is the 32-bit version. Use the 32-bit Windows files (those marked as win32 and certainly not the ones says 64) in http://emg.nysbc.org/projects/leginon/files for these. |
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7 | Here is the full list |
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8 | {{include(Windows_32_External_Package_Installers_Common)}} |
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9 | {{include(Comtypes_installer)}} |
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10 | 7 | Anchi Cheng | |
11 | 1 | Anchi Cheng | h2. Important: Install Python under a custom named folder |
12 | 11 | Anchi Cheng | |
13 | 16 | Anchi Cheng | *If your Talos/Arctica has a 64-bit Python pre-installed unde default python location C:\Python27, we need to name our installation with another name, such as C:\Python27-win32.* |
14 | 11 | Anchi Cheng | This is set during python installation. |
15 | 7 | Anchi Cheng | |
16 | 1 | Anchi Cheng | The rest of the installation is similar to other FEI systems. |
17 | 7 | Anchi Cheng | |
18 | 5 | Anchi Cheng | h2. instruments.cfg |
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20 | cs is *constant for sperical abberation* |
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22 | 13 | Anchi Cheng | For Talos series: |
23 | 5 | Anchi Cheng | <pre> |
24 | [TEM] |
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25 | 13 | Anchi Cheng | class: fei.Talos |
26 | 5 | Anchi Cheng | cs: 2.7e-3 |
27 | 1 | Anchi Cheng | </pre> |
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29 | 16 | Anchi Cheng | For Arctica series: |
30 | <pre> |
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31 | [TEM] |
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32 | class: fei.Arctica |
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33 | cs: 2.7e-3 |
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34 | </pre> |
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36 | 5 | Anchi Cheng | h2. Testing with pyscope |
37 | 1 | Anchi Cheng | |
38 | In python command |
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39 | 16 | Anchi Cheng | |
40 | For Talos: |
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41 | 5 | Anchi Cheng | <pre> |
42 | 14 | Anchi Cheng | from pyscope import fei |
43 | t = fei.Talos() |
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44 | 1 | Anchi Cheng | t.getMagnification() |
45 | </pre> |
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46 | 16 | Anchi Cheng | |
47 | For Arctica: |
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48 | <pre> |
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49 | 1 | Anchi Cheng | from pyscope import fei |
50 | 17 | Anchi Cheng | t = fei.Arctica() |
51 | 16 | Anchi Cheng | t.getMagnification() |
52 | </pre> |
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53 | 6 | Anchi Cheng | |
54 | h2. Trouble Shooting |
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56 | [[unable to initializ Tecnai interface error]] |
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57 | |||
58 | h2. Programs to open before Leginon Client: None |