FEI Talos installation specifics » History » Version 20
Anchi Cheng, 01/10/2022 07:53 PM
| 1 | 18 | Anchi Cheng | h1. FEI Talos/Arctica/Glacios installation specifics |
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| 2 | 1 | Anchi Cheng | |
| 3 | 7 | Anchi Cheng | h2. Install win32 version of python subpackages |
| 4 | 1 | Anchi Cheng | |
| 5 | Because all interaction with the scope uses COM interface that is only accessible through 32-bit architecture, python running Leginon component is the 32-bit version. Use the 32-bit Windows files (those marked as win32 and certainly not the ones says 64) in http://emg.nysbc.org/projects/leginon/files for these. |
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| 6 | |||
| 7 | Here is the full list |
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| 8 | {{include(Windows_32_External_Package_Installers_Common)}} |
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| 9 | {{include(Comtypes_installer)}} |
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| 10 | 7 | Anchi Cheng | |
| 11 | 1 | Anchi Cheng | h2. Important: Install Python under a custom named folder |
| 12 | 11 | Anchi Cheng | |
| 13 | 16 | Anchi Cheng | *If your Talos/Arctica has a 64-bit Python pre-installed unde default python location C:\Python27, we need to name our installation with another name, such as C:\Python27-win32.* |
| 14 | 11 | Anchi Cheng | This is set during python installation. |
| 15 | 7 | Anchi Cheng | |
| 16 | 1 | Anchi Cheng | The rest of the installation is similar to other FEI systems. |
| 17 | 7 | Anchi Cheng | |
| 18 | 5 | Anchi Cheng | h2. instruments.cfg |
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| 20 | cs is *constant for sperical abberation* |
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| 21 | |||
| 22 | 13 | Anchi Cheng | For Talos series: |
| 23 | 5 | Anchi Cheng | <pre> |
| 24 | [TEM] |
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| 25 | 13 | Anchi Cheng | class: fei.Talos |
| 26 | 5 | Anchi Cheng | cs: 2.7e-3 |
| 27 | 1 | Anchi Cheng | </pre> |
| 28 | |||
| 29 | 16 | Anchi Cheng | For Arctica series: |
| 30 | <pre> |
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| 31 | [TEM] |
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| 32 | class: fei.Arctica |
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| 33 | cs: 2.7e-3 |
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| 34 | </pre> |
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| 35 | |||
| 36 | 19 | Anchi Cheng | For Glacios series: |
| 37 | <pre> |
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| 38 | [TEM] |
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| 39 | class: fei.Glacios |
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| 40 | cs: 2.7e-3 |
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| 41 | </pre> |
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| 42 | |||
| 43 | 5 | Anchi Cheng | h2. Testing with pyscope |
| 44 | 1 | Anchi Cheng | |
| 45 | In python command |
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| 46 | 16 | Anchi Cheng | |
| 47 | For Talos: |
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| 48 | 5 | Anchi Cheng | <pre> |
| 49 | 14 | Anchi Cheng | from pyscope import fei |
| 50 | t = fei.Talos() |
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| 51 | 1 | Anchi Cheng | t.getMagnification() |
| 52 | </pre> |
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| 53 | 16 | Anchi Cheng | |
| 54 | For Arctica: |
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| 55 | <pre> |
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| 56 | 1 | Anchi Cheng | from pyscope import fei |
| 57 | 17 | Anchi Cheng | t = fei.Arctica() |
| 58 | 16 | Anchi Cheng | t.getMagnification() |
| 59 | </pre> |
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| 60 | 6 | Anchi Cheng | |
| 61 | 20 | Anchi Cheng | For Glacios: |
| 62 | <pre> |
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| 63 | from pyscope import fei |
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| 64 | t = fei.Glacios() |
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| 65 | t.getMagnification() |
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| 66 | </pre> |
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| 67 | |||
| 68 | 6 | Anchi Cheng | h2. Trouble Shooting |
| 69 | |||
| 70 | [[unable to initializ Tecnai interface error]] |
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| 71 | |||
| 72 | h2. Programs to open before Leginon Client: None |