Feature #139
closedtopologyAlignment.py
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Description
added 2 binaries to bin "can32.exe" & "can64.exe", and python script "topologyAlignment.py"
These files are to perform classification using a topology-based representing network, followed by alignment using mra.
Added a function to apEMAN.py for reading lst class files & defined necessary tables for uploading in appiondata.py
Committed revision 13050.
Updated by Amber Herold almost 15 years ago
- Status changed from In Code Review to In Test
Updated by Neil Voss almost 15 years ago
Hey Gabe, if you put an r in front of the revision, it automatically creates a link, e.g., r13050.
Also, if you add refs and the bug number to your subversion message it automatically links them, e.g., 'refs #139'. Jim showed me how to do this.
Updated by Neil Voss almost 15 years ago
I am going to give this a try on my data.
Updated by Neil Voss almost 15 years ago
- Status changed from In Test to Assigned
- Assignee changed from Amber Herold to Gabriel Lander
I liked the results, but still needs uploading to the database functionality.
For the maxlike program, I broke it into two parts (runMaxlike, uploadMaxlike), because I wanted the ability to run on garibaldi and some jobs went for more than two days.
For this program, I think it is fast enough to do it in a single script. source:trunk/appion/bin/uploadMaxlikeAlignment.py contains all the code you would need to implement this.
Updated by Neil Voss over 14 years ago
- Target version set to Appion/Leginon 2.1.0
Updated by Neil Voss over 14 years ago
- Status changed from Assigned to In Test
- Assignee changed from Gabriel Lander to Neil Voss