Electron Microscopy Group

06/07/2011

02:22 AM Leginon Leginon: RE: Combine method "median" suddenly stopped working

Finally, I found the cause of this problem:
For another software package, the _PYTHONPATH_ environment variable wa... Matthias Brunner

11/30/2010

10:33 AM Leginon Leginon: RE: Communication problem when setting beam intensity

Jim Pulokas wrote:
> Sorry, I never bothered to test my own script. Before you setMagnification, you have to initia... Matthias Brunner

11/24/2010

07:11 AM Leginon Leginon: RE: Returning Tecnai to z=x of parent image xyz...

Thanks for the detailed explanation!
I really like looking at the square in sq first before submitting that is wh... Matthias Brunner

07:06 AM Leginon Leginon: RE: Communication problem when setting beam intensity

Thanks for your input!
Anchi's script behaves as expected (intensity stays the same) - but Jim's causes an Magnifi... Matthias Brunner

11/23/2010

01:53 AM Leginon Leginon: Returning Tecnai to z=x of parent image xyz...

Hi there,
I select for instance 30 squares in the atlas, submit them in order to queue up subsquare targets. (So t... Matthias Brunner

01:31 AM Leginon Leginon: RE: Communication problem when setting beam intensity

Anchi Cheng wrote:
> Interesting point about adding dummy mags. Where do you add these? are these real magnificatio... Matthias Brunner

11/22/2010

01:00 AM Leginon Leginon: RE: Communication problem when setting beam intensity

Anchi Cheng wrote:
> Is there any upgrade on the Tecnai side? They change the unit for the same property call once ... Matthias Brunner

11/19/2010

05:52 AM Leginon Leginon: Communication problem when setting beam intensity

Hi there...again me with weird problems that have suddenly appeared (again, not aware of any changes).
I imported ... Matthias Brunner

11/18/2010

06:21 AM Leginon Leginon: Combine method "median" suddenly stopped working

Hi there!
In the correction node, median as combine method instead of average suddenly stopped working - I now get... Matthias Brunner

11/11/2010

06:24 AM Leginon Feature #559: Retry with higher defocus when cross-correlation not possible

This is especially true for cryo images at 300kV...would be great if you could look into this. Matthias Brunner