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Appion/Leginon 2.2.1

closed

62%

16 issues   (10 closed — 6 open)

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Bug

7/12
Feature

3/4
Related issues
Bug #1359: stack remake from a stack may have different particle order Actions
Bug #1385: make executable from appion bin called from refineJob jobfile using what defined in appionwrapper Actions
Bug #1688: Crud Finding results not available in Appion Stack Creation Actions
Bug #1706: test-image in Dogpicker not working Actions
Bug #1725: Postproc.php just show command is not displayed correctly Actions
Bug #1788: jpeg module is not detected in php-gd by myamiweb/test/checkwebserver.php Actions
Bug #1831: --ctftilt= always show up in prepRefineForm.php for Frealign Actions
Bug #1834: Missing help info for prepRefineForm.php frealign parameters Actions
Bug #1870: get "No error code has been set by the system." when submit to guppy or garibaldi it takes long to start Actions
Bug #1887: prepFrealign don't always show previous recon iterations for initializing parameters if not all particles were used in previously Actions
Bug #1906: imagic_to_mrc function in pyami.imagic2mrc.py need a flip in y axis Actions
Bug #2023: SelectPreparedRecon.php tries to copy files to defualt cluster path, even if the user has modified the path in the gui Actions
Feature #1743: Add the STARTUP_MESSAGE config file entry to the config wizard Actions
Feature #1854: select ctf estimation run in imageviewer display Actions
Feature #1897: remove mirror in general refinement upload particle parameter file Actions
Feature #1995: Refinement commands can now be viewed without being logged into appion processing host. Actions