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Bug #1533

closed

Bug #1323: Recon Refactoring

uploaded EMAN eulers are incorrect

Added by Anchi Cheng about 13 years ago. Updated almost 11 years ago.

Status:
Closed
Priority:
High
Assignee:
Amber Herold
Category:
Python scripting
Target version:
Appion/Leginon 2.2.0
Start date:
01/23/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.2.0
Show in known bugs:
No
Workaround:

Description

According to appion/bin/uploadEMANRefine.py particle_data...txt file is in EMAN's euler definition taken from proj.n.txt in combination to its class.m.txt.

However, appion/appionlib/uploadRecon.py insertRefineParticleData function goes through

alt, az, phi = apXmipp.convertXmippEulersToEman(particledata[i]['phi'], particledata[i]['theta'], particledata[i]['omega'])

So what should be changed? Making EMAN not to go through XmippToEman convertion or change how particle_data.txt writes them?

#1

Updated by Dmitry Lyumkis about 13 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Dmitry Lyumkis to Anchi Cheng
#2

Updated by Anchi Cheng about 13 years ago

  • Assignee changed from Anchi Cheng to Dmitry Lyumkis
#4

Updated by Dmitry Lyumkis almost 13 years ago

  • Status changed from In Code Review to In Test
  • Assignee changed from Dmitry Lyumkis to Amber Herold
#5

Updated by Amber Herold almost 11 years ago

  • Status changed from In Test to Closed
  • Affected Version changed from Appion/Leginon 2.2.0 (trunk) to Appion/Leginon 2.2.0
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