Feature #1557
closed
break up makestack2.py to extract particledata from images and making stack
Added by Anchi Cheng almost 13 years ago.
Updated over 12 years ago.
Category:
Python scripting
Description
Want to create a base class that only extract particledata according to all the criteria of the current makestack2.py so that we can use them for other kind of particle processing.
- Status changed from Assigned to In Code Review
- Assignee changed from Anchi Cheng to Gabriel Lander
r16337 added apParticleExtractor.py to appionlib and move all image and particle elimination functions there.
Gabe, I assign to you to code-review since you last worked on it. If you can't do it, assign it to someone else.
Assign Lauren to test since I didn't test the helical stack making.
- Status changed from In Code Review to In Test
- Assignee changed from Gabriel Lander to Lauren Fisher
Anchi, this all looks good - great work. It's about time we started breaking up this huge function into more manageable components. The only thing I did was to make a small "getCS" function inside makestack, since we keep doing it over and over. Should be ready for testing.
r16352
Lauren, do you think you will get a chance to test this in the next few days? if not, I'll assign to someone else. Getting ready for 2.2 release...
- Status changed from In Test to Closed
I ran it on Guppy with various parameters and everything tested fine for me. Looks like its good to go!
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