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Bug #2028

closed

CTF insertion not working

Added by Dmitry Lyumkis over 12 years ago. Updated over 12 years ago.

Status:
Closed
Priority:
Urgent
Assignee:
Category:
-
Target version:
-
Start date:
08/31/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

Description

I'm trying to run CTF estimation using the latest Appion versions, and something broken. I get this error for both ACE2 and CTFfind3.

Traceback (most recent call last):
File "/home/dlyumkis/myami/appion/bin/pyace2.py", line 23, in <module>
from appionlib.apCtf import ctfinsert
ImportError: cannot import name ctfinsert

I tried the betaversion (yesterday's), and I get this error:

File "/opt/myamisnap/lib/appionlib/apCtf/ctfinsert.py", line 45, in validateAndInsertCTFData
ctfvalues = runCTFdisplayTools(imgdata, ctfvalues, opimagedir)
File "/opt/myamisnap/lib/appionlib/apCtf/ctfinsert.py", line 80, in runCTFdisplayTools
ctfdisplaydict = ctfdisplay.makeCtfImages(imgdata, ctfvalues)
File "/opt/myamisnap/lib/appionlib/apCtf/ctfdisplay.py", line 989, in makeCtfImages
ctfdisplaydict = a.CTFpowerspec(imgdata, ctfdata)
File "/opt/myamisnap/lib/appionlib/apCtf/ctfdisplay.py", line 876, in CTFpowerspec
outerbound*1e10, self.apix)
File "/opt/myamisnap/lib/appionlib/apCtf/ctftools.py", line 183, in powerSpectraToOuterResolution
powerspec = trimPowerSpectraToOuterResolution(data, outerresolution, freq)
File "/opt/myamisnap/lib/appionlib/apCtf/ctftools.py", line 207, in trimPowerSpectraToOuterResolution
%(outerresolution, initmaxres))
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 57, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception:
  • FATAL ERROR ***
    Requested resolution (5.000) is not available (6.773)

Please help

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