Bug #2529
closedTrash does not Hide images from processing
0%
Description
"Trashed" images will still be processed by Appionloop, but they will not show up in the viewer. This becomes an issue when there are multiple version of aligned images - If you trash the first aligned stack of images, these are the ones that will be processed instead of the later ones.
Updated by Anchi Cheng about 11 years ago
- Status changed from New to In Code Review
- Assignee changed from Anchi Cheng to Amber Herold
- Priority changed from Normal to Immediate
- Affected Version changed from Appion/Leginon 2.1.0 to Appion/Leginon 3.0.0
make trash status considered as rejected in various places in r17906 and r17907
Amber, please ask JC to update myami/trunk on garibaldi since this is a serious bug.
Updated by Anchi Cheng about 11 years ago
- Project changed from Leginon to Appion
Updated by Anchi Cheng about 11 years ago
- Status changed from In Code Review to In Test
- Assignee changed from Amber Herold to Kuang-Lei Tsai
Testing:
1. mark an image as trash in myamiweb imageviewer.
2. run any pariticle picking program or ctf estimation that would include this image if it is not rejected on garibaldi
3. check the log afterward to see if the trashed image were processed
Kuang-Lei, Use one of your practice session that has few images would be the easiest.
Updated by Kuang-Lei Tsai about 11 years ago
- Status changed from In Test to Closed
I just put one image in trash and ran the dog picking. The log file shows that the image deleted by "trash" is not processed. So it works.
Updated by Rui Zhang about 11 years ago
Hi, I tried the latest myamiweb Revision: 17910.
I found if I "trash" an image and refresh the web page in Chrome, the trashed images come back.
Updated by Anchi Cheng about 11 years ago
You need to apply schema update first
http://emg.nysbc.org/projects/leginon/wiki/How_to_Update_from_v21_(Linux)#Run-Database-Update-Script