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Bug #2597

closed

CL2D crashes

Added by Reginald McNulty almost 11 years ago. Updated almost 11 years ago.

Status:
Won't Fix or Won't Do
Priority:
Normal
Assignee:
-
Category:
-
Target version:
-
Start date:
12/04/2013
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

Description

I've run CL2D with 13,938 particles and requesting 300 references. Below is the last few lines of the log file before crashing:

Xmipp: /opt/applications/openmpi/1.4.3/gnu/bin/mpirun -np 64 /opt/applications/xmipp/2.4/gnu/bin/xmipp_mpi_class_averages -i /ami/data15/appion/13oct11a/align/cl2d7/partlist.sel -codes 300 -ite
r 15 -o /ami/data15/appion/13oct11a/align/cl2d7/part13dec02p00 -fast -useCorrelation -classicalMultiref -alignImages
=>> PBS: job killed: node 2 (node0656) requested job terminate, 'EOF' (code 1099) - received SISTER_EOF attempting to communicate with sister MOM's

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