Appion

Hi all,

I hope all is well with you! I am trying to run OptiMod on Goby, and running into some issues. Firstly, I can't submit a job through the web interface. I don't get an error or anything, just a blank page. This is less of an issue since I can run a job from the terminal.

Once I do start a job, it runs fine until it calls apCluster.exe (Just after the ML3D alignment, I think). I then get the error:

Traceback (most recent call last):
File "/opt/myamisnap/bin/OptiMod.py", line 895, in <module>
ACL.start()
File "/opt/myamisnap/bin/OptiMod.py", line 806, in start
preffile, box, apix)
File "/opt/myamisnap/lib/appionlib/apCommonLines.py", line 871, in run_affinity_propagation
apDisplay.printError("apCluster did not run")
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception: * FATAL ERROR *
apCluster did not run

You can see a run where this occurred in /ami/exdata/appion/14apr23b/angrecon/acl2_iter/acl2_iter.appionsub.log

Thanks and please let me know if I can provide more information.
-Dipa