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Bug #3569

closed

makestack "pixlimit" feature adding black pixels.

Added by Gabriel Lander about 9 years ago. Updated about 9 years ago.

Status:
Closed
Priority:
High
Assignee:
Category:
Image Processing
Target version:
Start date:
09/17/2015
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:

Description

When we use the "pixlimit=4" option in makestack, our particles have lots of black spots appearing on them, like high intensity pixels are being replaced with low intensity ones. I'm attaching images of a stack made with and without this option. Not sure it's capping the value properly.


Files

withPixLimit.png (147 KB) withPixLimit.png with pixlimit=4 Gabriel Lander, 09/17/2015 02:31 AM
noPixLimit.png (141 KB) noPixLimit.png without pixlimit option Gabriel Lander, 09/17/2015 02:31 AM
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