Project

General

Profile

Actions

Bug #4106

closed

error msg from auto align tilt pair

Added by Zhening Zhang over 8 years ago. Updated over 8 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
04/13/2016
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.3
Show in known bugs:
No
Workaround:

Description

When I used auto align tilt pair, the following error msgs appear.

Beginning Main Loop
... Pixel size: 1.54
... Refining tilt axis angles
using slow tilt angle calculator
Traceback (most recent call last):
File "/home/cnegro/myami-trunk/appion/bin/tiltAutoAligner.py", line 346, in
imgLoop.run()
File "/home/cnegro/myami-trunk/appion/appionlib/appionLoop2.py", line 87, in run
results = self.loopProcessImage(imgdata)
File "/home/cnegro/myami-trunk/appion/bin/tiltAutoAligner.py", line 124, in loopProcessImage
result = self.runTiltAligner(imgdata, tiltdata)
File "/home/cnegro/myami-trunk/appion/bin/tiltAutoAligner.py", line 310, in runTiltAligner
result = autotilter.processTiltPair(imgpath, tiltpath, picks1, picks2, theta, outfile1, pixdiam, tiltaxis)

File "/home/cnegro/myami-trunk/appion/appionlib/apTilt/autotilt.py", line 348, in processTiltPair
origin, newpart, snr, bestang = apTiltShift.getTiltedCoordinates(img1, img2, tiltangle, picks1, True,
tiltaxis, msg=msg)
File "/home/cnegro/myami-trunk/appion/appionlib/apTilt/apTiltShift.py", line 37, in getTiltedCoordinates

filt1 = apImage.highPassFilter(binned1, apix=1.0, radius=20.0, localbin=4/bin)
AttributeError: 'module' object has no attribute 'highPassFilter'

Actions

Also available in: Atom PDF