Task #4379
closed
break up apDDprocess.py to separate camera selection and alignment program selection
Added by Anchi Cheng over 8 years ago.
Updated almost 7 years ago.
Description
It is time to do this to make new programs easier to add
added scripts for motioncorr2, early commits don't reference this issue number, frame aligner with options:
makeDDAlignMotionCorr2_UCSF.py
example test command:
makeDDAlignMotionCorr2_UCSF.py --mrclist=15nov28b_gr1_00006gr_00049sq_00006hl_00002ed.mrc --rundir=/data2/log-l/frames/15nov28b/ddstack/test --runname=test --projectid=1 --session=15nov28b --align --commit --no-continue --alignbfactor=500 --gpuid=1 --Patch=5,5 --doseweight --totaldose=90.0 --nrw=3 --Iter=10 --Tol=0.5 --bin=1 --alignlabel=e
- Related to Feature #4512: Add MotionCor2 from UCSF to appion added
- Related to Task #4366: rewrite makeDDRawFrameStack.py and its library for better extension added
- Status changed from Assigned to Closed
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