Bug #4482
openPrep job for Frealign fails
0%
Description
With the following message:
Step 3B: from original stack create a new stack file with binning and filtering ready for processing
Traceback (most recent call last):
File "/opt/myamisnap/bin/prepRefineFrealign.py", line 260, in <module>
app.start()
File "/opt/myamisnap/lib/appionlib/apPrepRefine.py", line 420, in start
self.__processStack(prepdata)
File "/opt/myamisnap/lib/appionlib/apPrepRefine.py", line 358, in __processStack
self.preprocessStack()
File "/opt/myamisnap/bin/prepRefineFrealign.py", line 84, in preprocessStack
self.getStackRunParams()
File "/opt/myamisnap/bin/prepRefineFrealign.py", line 77, in getStackRunParams
self.stackrunlogparams = apScriptLog.getScriptParamValuesFromRunname(stackrun['stackRunName'],stackdata['path'],jobdata=None)
File "/opt/myamisnap/lib/appionlib/apScriptLog.py", line 25, in getScriptParamValuesFromRunname
program = getScriptProgramRunFromRunname(runname,pathdata, jobdata)
File "/opt/myamisnap/lib/appionlib/apScriptLog.py", line 17, in getScriptProgramRunFromRunname
apDisplay.printError('No ScriptProgramRun is found for runname %s' % (runname))
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception:
* FATAL ERROR *
No ScriptProgramRun is found for runname stack42
Thanks - Giovanna