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Bug #4725
closedMakestack fails to create average stack when generating only Eman boxes
Status:
Closed
Priority:
Normal
Assignee:
Category:
Image Processing
Target version:
Start date:
01/26/2017
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:
Description
this is the end of the log file:
File "/opt/myamisnap/lib/appionlib/apStackMeanPlot.py", line 37, in makeStackMeanPlot
vstackdata = apStack.getVirtualStackParticlesFromId(stackid)
File "/opt/myamisnap/lib/appionlib/apStack.py", line 81, in getVirtualStackParticlesFromId
apDisplay.printError("Virtual stack: %i does not have original stack information")
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception:
File "/opt/myamisnap/lib/appionlib/apStackMeanPlot.py", line 37, in makeStackMeanPlot
vstackdata = apStack.getVirtualStackParticlesFromId(stackid)
File "/opt/myamisnap/lib/appionlib/apStack.py", line 81, in getVirtualStackParticlesFromId
apDisplay.printError("Virtual stack: %i does not have original stack information")
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception:
- FATAL ERROR ***
Virtual stack: %i does not have original stack information
Updated by Anchi Cheng almost 8 years ago
- Subject changed from Makestack fails (generating only Eman boxes to Makestack fails to create average stack when generating only Eman boxes
Updated by Anchi Cheng almost 8 years ago
- Status changed from New to In Code Review
- Assignee changed from Anchi Cheng to Gabriel Lander
- Target version set to Appion/Leginon 3.3
Gabe,
Please check if I break something for you.
Updated by Gabriel Lander almost 8 years ago
- Status changed from In Code Review to Closed
looks good. I've been ignoring this error for a long time, thanks for fixing it.
Updated by Neil Voss over 7 years ago
- Related to Bug #4842: makestack with only boxfiles checked, produces no boxfiles added
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