Bug #737
closed
viewstack.php not displaying option for templatestack creation with $alignId
Added by Dmitry Lyumkis over 14 years ago.
Updated about 14 years ago.
Affected Version:
Appion/Leginon 2.0.1
Description
fixed, includes templatestack creation option with $alignId in $_GET variable
also deleted the option to create an imagic3d0, which is basically useless
updated uploadTemplateStack.py so that it now allows the use of alignId and looks for the associated references or raw particles. If the --alignstackavgs is specified, then it will look for the associated reference file. Otherwise, it will look at the raw particles
also updated viewstack to pass along a "refs=1" flag in the $_GET array and uploadTemplateStack.php to read that
- Status changed from New to In Code Review
- Assignee changed from Dmitry Lyumkis to Pick-Wei Lau
- Status changed from In Code Review to In Test
- Assignee changed from Pick-Wei Lau to Dmitry Lyumkis
from viewstack, in "exclude" mode, the excluded class averages are not passed over to uploadTemplateStack.
Also, if no class average is selected, it still allows the user to proceed to uploadTemplateStack.php but the python script crashes because no keepfile is passed on.
Basically, I think the uploadTemplateStack button on viewstack.php should be disabled or just do nothing if no class is selected. OR maybe the "exclude" mode should be enabled?
- Status changed from In Test to Closed
tested, works fine for me
Also available in: Atom
PDF