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Neil Voss, 05/13/2010 09:08 AM
Install SPIDER¶
Install documentation at wadsworth.org¶
the Wadsworth Institute provides detailed documentation" on how to install SPIDER on various systems. Below we cover a our way to get it working on your system.
Download SPIDER binary from wadsworth.org (250 MiB)¶
Most of our SPIDER scripts were originally designed around SPIDER v14 and v15, but we are diligently working toward compatibility with SPIDER v18. That said you are probably best off using the newest version of SPIDER (v18.10 as of May 2010) and then reporting any bugs to us.
Extract the archive¶
tar -zxvf spiderweb.18.10.tar.gz
The archive will create 3 folders: spider, spire, and web. At this time only the spider program is used within Appion, you can safely ignore web and spire.
Install SPIDER¶
- Copy the spider folder to global directory:
sudo mv -v spider /usr/local/
- Next, you need to determine which version of the spider binary you need to use on your system.
cd /usr/local/spider/bin ls spider* spider_linux spider_linux_mp_intel64 spider_linux_mp_opt64 spider_osx_64_pgi spider_linux_mp_intel spider_linux_mpi_opt64 spider_osx_32_pgi
sudo ln -sv /usr/local/spider/bin/spider /usr/local/
Set environmental variables¶
For BASH
, create an spider.sh and add the following lines:¶
export SPIDER=/usr/local/spider export SPMAN_DIR=${SPIDER}/man export SPPROC_DIR=${SPIDER}/proc export SPRGB_DIR=${SPIDER}/rgb
For C
shell, create an spider.csh and add the following lines:¶
setenv SPIDER /usr/local/spider setenv SPMAN_DIR ${SPIDER}/man setenv SPPROC_DIR ${SPIDER}/proc setenv SPRGB_DIR ${SPIDER}/rgb
And then add it to the global /etc/profile.d/ folder¶
sudo cp -v spider.sh /etc/profile.d/spider.sh sudo chmod 755 /etc/profile.d/spider.sh -or- sudo cp -v spider.csh /etc/profile.d/spider.csh sudo chmod 755 /etc/profile.d/spider.csh
Updated by Neil Voss over 14 years ago · 13 revisions