Project

General

Profile

Actions

Bug #2922

closed

DoG picker is broken!

Added by Melody Campbell about 10 years ago. Updated about 10 years ago.

Status:
Closed
Priority:
Urgent
Assignee:
Sargis Dallakyan
Category:
-
Target version:
-
Start date:
09/05/2014
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.1.0
Show in known bugs:
No
Workaround:

Description

Tried to run dog picker, here is the command I used and the error:

/opt/myamisnap/bin/appion dogPicker.py --runname=dogrun1 --rundir=/ami/data15/appion/14sep04e/extract/dogrun1 --projectid=450 --session=14sep04e --no-rejects --no-commit --no-continue --mrclist=14sep04e_00006sq_v01_00010hl_v02_00025en.mrc --maxsize=1.2 --peaktype=centerofmass --maxthresh=1.5 --thresh=.4 --median=2 --lowpass=25 --highpass=0 --planereg --bin=8 --diam=100 --pixlimit=4.0

Traceback (most recent call last):
File "/opt/myamisnap/bin/dogPicker.py", line 9, in <module>
from appionlib import particleLoop2
File "/opt/myamisnap/lib/appionlib/particleLoop2.py", line 12, in <module>
from appionlib import apPeaks
File "/opt/myamisnap/lib/appionlib/apPeaks.py", line 6, in <module>
from joblib import Parallel, delayed
ImportError: No module named joblib


Related issues 1 (0 open1 closed)

Related to Appion - Bug #2923: tiltaligner bugClosedSargis Dallakyan09/08/2014

Actions
Actions

Also available in: Atom PDF