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Bug #3027

closed

transformations are not performed in Xmipp3 CL2D

Added by Dmitry Lyumkis over 9 years ago. Updated over 9 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Sargis Dallakyan
Category:
-
Target version:
-
Start date:
03/23/2015
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.1.0
Show in known bugs:
No
Workaround:

Description

after running CL2D in Xmipp3, the alignedStack.hed file is not transformed according to the alignment parameters. Therefore, if you want to see the aligned particles in the viewer, you will not be able to do this. There is an additional command that needs to be run to apply the transformation parameters to the particles. I've added this in a fix.

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 #1

Updated by Dmitry Lyumkis over 9 years ago

  • Status changed from New to In Code Review
  • Assignee changed from Dmitry Lyumkis to Sargis Dallakyan
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 #2

Updated by Sargis Dallakyan over 9 years ago

  • Status changed from In Code Review to Closed

Thank you very much Dmitry! The code looks good; I tested this on zz07jul25b - GroEL large test session on guppy and it works as expected. Closing this bug.

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