Appion

still an error:

Starting image 7 ( skip:114, remain:141 ) id:3267910, file: 15sep15a_010sq_01hl_03ed
 ... Pixel size: 1.31
 ... Found 1 particles
 ... Boxing is done on /data2/log-l/leginon/15sep15a/rawdata/15sep15a_00010sq_00001hl_00003ed.mrc
[CTF run]   method: ctffind | runname ctffindrun3
[CTF param] def1: 1.94e-06 | def2: 1.95e-06 | angle: -3.5 | ampcontr 0.07 | defratio 1.007
[CTF stats] conf_30-10: 0.952 | conf_5peak: 0.935 | res_0.8: 6.4A | res_0.5 4.2A
 ... using ctfvaluesfile: tmp_ctfvaluesfile.txt
 ... ace2 command: /data2/log-l/progs/myami/appion/bin/ace2correct.exe -ctf tmp_ctfvaluesfile.txt -apix 1.310 -img /data2/log-l/leginon/15sep15a/rawdata/15sep15a_00010sq_00001hl_00003ed.mrc -out /data2/log-l/appion/15sep15a/stacks/test_stack/15sep15a_00010sq_00001hl_00003ed.mrc.corrected.mrc -wiener 0.1
 ... phaseflipping entire micrograph with defocus 1.943 microns
 ... boxing 1 particles into temp file: /data2/log-l/appion/15sep15a/stacks/test_stack/15sep15a_010sq_01hl_03ed.hed
 ... writing stack to disk from memory: /data2/log-l/appion/15sep15a/stacks/test_stack/15sep15a_010sq_01hl_03ed.hed
 ... wrote 1 particles to header file
 ... finished in 13.73 msec
 ... reading stack from disk into memory: 15sep15a_010sq_01hl_03ed.hed
 ... read 1 particles equaling 256.0 kB in size
 ... finished in 2.68 msec
 ... gathering mean and stdev data
 ... phase flipped whole image already
 ... 1 particles were boxed out from 15sep15a_010sq_01hl_03ed
 ... do not break function now otherwise it will corrupt stack
 ... filtering particles and adding to stack

['/usr/local/appion/EMAN2/bin', '/data2/log-l/progs/myami/appion', '/usr/local/appion/EMAN2/lib']
Found 6 ctf values
0.115 -- ctffindrun6
0.115 -- ctffindrun5
0.118 -- ctffindrun4
0.134 -- ctffindrun1
*** 0.134
Found 6 ctf values
0.116 -- ctffindrun6
0.119 -- ctffindrun5
0.115 -- ctffindrun4
0.116 -- ctffindrun3
0.115 -- ctffindrun2
0.118 -- ctffindrun1
*** 0.119
Found 6 ctf values
0.132 -- ctffindrun6
0.131 -- ctffindrun5
0.128 -- ctffindrun4
0.105 -- ctffindrun3
0.129 -- ctffindrun2
0.132 -- ctffindrun1
*** 0.132
Found 6 ctf values
0.094 -- ctffindrun6
0.081 -- ctffindrun5
0.090 -- ctffindrun3
0.076 -- ctffindrun1
0.091 -- ctffindrun2
*** 0.094
Found 6 ctf values
0.122 -- ctffindrun6
0.122 -- ctffindrun5
0.120 -- ctffindrun1
0.120 -- ctffindrun3
0.121 -- ctffindrun2
*** 0.122
Found 6 ctf values
0.106 -- ctffindrun6
0.113 -- ctffindrun5
0.113 -- ctffindrun4
0.113 -- ctffindrun1
0.114 -- ctffindrun3
0.115 -- ctffindrun2
*** 0.115
Found 3 ctf values
0.199 -- ctffindrun1
0.225 -- ctffindrun2
0.238 -- ctffindrun3
*** 0.238
Traceback (most recent call last):
  File "/data2/log-l/progs/myami/appion/bin/makestack2.py", line 1213, in <module>
    makeStack.run()
  File "/data2/log-l/progs/myami/appion/appionlib/appionLoop2.py", line 86, in run
    results = self.loopProcessImage(imgdata)
  File "/data2/log-l/progs/myami/appion/appionlib/appionLoop2.py", line 136, in loopProcessImage
    return self.processImage(imgdata)
  File "/data2/log-l/progs/myami/appion/appionlib/apParticleExtractor.py", line 510, in processImage
    total_processed_particles = self.processParticles(imgdata,partdatas,shiftdata)
  File "/data2/log-l/progs/myami/appion/bin/makestack2.py", line 89, in processParticles
    totalpart = self.mergeImageStackIntoBigStack(self.imgstackfile, imgdata)
  File "/data2/log-l/progs/myami/appion/bin/makestack2.py", line 774, in mergeImageStackIntoBigStack
    %(particle.shape[0], particle.shape[1], self.boxsize))
  File "/data2/log-l/progs/myami/appion/appionlib/apDisplay.py", line 65, in printError
    raise Exception, colorString("\n *** FATAL ERROR ***\n"+text+"\n\a","red")
Exception: 
 *** FATAL ERROR ***
particle shape (256x1) is smaller than boxsize (256)