Appion

During job preparation for xmipp projection matching, there was the following error (/data2/log-l/appion/15sep10a/recon/xmipp_recon1):

Step 3B: from original stack create a new stack file with binning and filtering ready for processing

['/usr/local/appion/EMAN2/bin', '/data2/log-l/progs/myami/appion', '/usr/local/appion/EMAN2/lib']
Traceback (most recent call last):
File "/data2/log-l/progs/myami/appion/bin/prepRefineXmipp.py", line 29, in <module>
app.start()
File "/data2/log-l/progs/myami/appion/appionlib/apPrepRefine.py", line 420, in start
self.__processStack(prepdata)
File "/data2/log-l/progs/myami/appion/appionlib/apPrepRefine.py", line 358, in __processStack
self.preprocessStack()
File "/data2/log-l/progs/myami/appion/appionlib/apPrepRefine.py", line 122, in preprocessStack
apDisplay.printError("stackfile does not exist: "+self.stack['file'])
File "/data2/log-l/progs/myami/appion/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception: * FATAL ERROR *
stackfile does not exist: /data2/log-l/appion/15sep10a/stacks/alignsub63/start.hed

Current workaround is to make a new stack from the substack, which generates a start.hed file.