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Feature #3950

open

Create CTF test dataset within Docker

Added by Neil Voss over 8 years ago. Updated about 7 years ago.

Status:
Assigned
Priority:
High
Assignee:
Category:
-
Target version:
-
Start date:
02/15/2016
Due date:
% Done:

0%

Estimated time:

Files


Related issues 7 (4 open3 closed)

Related to Appion - Feature #3549: Create Docker container for running appionAssignedNeil Voss09/11/2015

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Related to Appion - Bug #3494: difficult image for new ctfdisplay.py to do noise subtractionIn TestNeil Voss08/31/2015

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Related to Appion - Bug #3559: Thon ring contrast is lower on new ctfdisplay 2D plotIn TestCarl Negro09/15/2015

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Related to Appion - Bug #3547: ctffind4 hard to control defocus rangeIn Code ReviewAnchi Cheng09/10/2015

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Related to Appion - Bug #3438: noise subtraction in ctfdisplay normalization errorClosedGabriel Lander08/26/2015

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Related to Appion - Bug #3356: Ctf Display does not work as well when extending resolution past 5 ÅClosed08/12/2015

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Related to Appion - Bug #3942: Create a CTF test datasetClosedNeil Voss02/10/2016

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Actions #1

Updated by Neil Voss over 8 years ago

  • Related to Feature #3549: Create Docker container for running appion added
Actions #2

Updated by Neil Voss over 8 years ago

  • Related to Bug #3494: difficult image for new ctfdisplay.py to do noise subtraction added
Actions #3

Updated by Neil Voss over 8 years ago

  • Related to Bug #3559: Thon ring contrast is lower on new ctfdisplay 2D plot added
Actions #4

Updated by Neil Voss over 8 years ago

  • Related to Bug #3547: ctffind4 hard to control defocus range added
Actions #5

Updated by Neil Voss over 8 years ago

  • Related to Bug #3438: noise subtraction in ctfdisplay normalization error added
Actions #6

Updated by Neil Voss over 8 years ago

  • Related to Bug #3356: Ctf Display does not work as well when extending resolution past 5 Å added
Actions #7

Updated by Neil Voss over 8 years ago

  • Related to Bug #3942: Create a CTF test dataset added
Actions #8

Updated by Gabriel Lander about 7 years ago

CTFfind4 estimates to 3.7 angstroms, but analyses fail.
KEV = 200
CS = 2.7
apix = 0.56

Actions #10

Updated by Scott Stagg about 7 years ago

Cs 2.7
Apix 1.01
300 kV

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