Start with existing CentOS 5.3 64-bit installation¶

• Table of contents
• Start with existing CentOS 5.3 64-bit installation
  • 1 Download additional software
  • 2 Database Server Installation
  • 3 Processing Server Installation
  • 4 Web Server Installation
    • Initialize database tables from the web tools
  • 5 Install external packages
    • Compile Xmipp for OpenMPI
  • 6 Install a PBS job submission system
  • 7 Do testing (Start at 4 of any flavor)

1 Download additional software¶

Download additional Software

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2 Database Server Installation¶

Setup MySQL database

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3 Processing Server Installation¶

Setup Appion programs

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4 Web Server Installation¶

Refer to Web Server Installation

Initialize database tables from the web tools¶

Please consult Create a test project and processing database

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5 Install external packages¶

Please follow individual package installation instruction provided with them

Compile Xmipp for OpenMPI¶

Install Xmipp

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6 Install a PBS job submission system¶

Install PBS

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7 Do testing (Start at 4 of any flavor)¶

Get started with a project
This has some repeated information.
Basically need to do the following:

1. Add a group
2. Add a user
3. Add instruments
4. Create a project
5. Create the project database
6. Upload images to a new session
7. View the images
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