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Leginon

Leginon is a system designed for automated collection of images from a transmission electron microscope. Instruments supported: FEI Tecnai series TEM, Tietz and Gatan CCD cameras.

Subject Author Created Replies Last message
Tomography tracking during tilt Jian Shi 03/08/2018 11:42 PM 3 Added by Anchi Cheng over 6 years ago
RE: Tomography tracking during tilt
Normalization error during atlas publishing Jason Porta 03/08/2018 11:33 AM 2 Added by Jason Porta over 6 years ago
RE: Normalization error during atlas publishing
XMIPP Wiki instructions out of date Patrick Goetz 01/31/2018 09:11 AM 1 Added by Anchi Cheng almost 7 years ago
RE: XMIPP Wiki instructions out of date
stage position or image shift mode in Exposure collection? Aguang Dai 01/29/2018 06:13 PM 4 Added by Aguang Dai almost 7 years ago
RE: stage position or image shift mode in Exposure collec...
temcontroller node Jason Porta 01/30/2018 10:48 AM 2 Added by Jason Porta almost 7 years ago
RE: temcontroller node
SOLVED: MotionCor2 requires libcufft.so.8.0? Patrick Goetz 01/25/2018 05:42 PM 6 Added by Patrick Goetz almost 7 years ago
RE: MotionCor2 requires libcufft.so.8.0?
K2 image and movie rotation and flip Aguang Dai 01/23/2018 12:45 AM 3 Added by Anchi Cheng almost 7 years ago
RE: image shift matrix failed after K2 rotation and flip
SOLVED: chmod +x rawtransfer.py? Patrick Goetz 01/17/2018 02:37 PM 5 Added by Anchi Cheng almost 7 years ago
RE: SOLVED: chmod +x rawtransfer.py?
Removing data older than x Christopher Lilienthal 05/05/2017 05:45 PM 3 Added by Anchi Cheng almost 7 years ago
RE: Removing data older than x
Beam tilt calibration: microprobe vs. nanoprobe Michael Cianfrocco 02/27/2017 07:30 PM 8 Added by Anchi Cheng almost 7 years ago
RE: Beam tilt calibration: microprobe vs. nanoprobe
SOLVED: leginon on Microscope PC wants an image directory -- what should it be? Patrick Goetz 12/14/2017 03:48 PM 2 Added by Patrick Goetz almost 7 years ago
RE: leginon on Microscope PC wants an image directory -- ...
SOLVED: What is the name of the leginon program(s) which run on the camera/microscope PCs? Patrick Goetz 12/11/2017 05:36 PM 2 Added by Patrick Goetz almost 7 years ago
RE: What is the name of the leginon program(s) which run ...
RCT Error Related to CV Module... Duncan Sousa 04/06/2017 11:37 AM 3 Added by Anchi Cheng almost 7 years ago
RE: RCT Error Related to CV Module...
frame path column in the leginondb.SessionData table populated from Christopher Lilienthal 07/13/2016 05:45 PM 7 Added by Christopher Lilienthal about 7 years ago
RE: frame path column in the leginondb.SessionData table ...
MSI-RCT (3.0) tilt tracking problem.... Duncan Sousa 08/25/2017 06:26 PM 3 Added by Anchi Cheng about 7 years ago
RE: MSI-RCT (3.0) tilt tracking problem....
DM acquired shape different than received shape Michael Cianfrocco 08/17/2017 12:51 PM 4 Added by Anchi Cheng over 7 years ago
RE: DM acquired shape different than received shape
Suggestion - Min Std. dev ice thickness option in Exposure targeting Andrey Malyutin 03/09/2017 02:22 PM 4 Added by Andrey Malyutin over 7 years ago
RE: Suggestion - Min Std. dev ice thickness option in Exp...
Refocus second half of tilt series? Morgan Beeby 08/17/2017 09:23 AM 1 Added by Anchi Cheng over 7 years ago
RE: Refocus second half of tilt series?
Restore calibrations from a previous Leginon 3.1 install to a new Leginon 3.2 install? Morgan Beeby 07/06/2017 02:27 PM 2 Added by Morgan Beeby over 7 years ago
RE: Restore calibrations from a previous Leginon 3.1 inst...
Leginon on CentOS (RHEL) 7 for remote acquisition computer Christopher Lilienthal 06/29/2017 11:28 AM 2 Added by Neil Voss over 7 years ago
RE: Leginon on CentOS (RHEL) 7 for remote acquisition com...
Movies per minute for 'typical' K2 movie Michael Cianfrocco 04/24/2017 06:13 PM 3 Added by Anchi Cheng over 7 years ago
RE: Movies per minute for 'typical' K2 movie
(python:5205): Gdk-WARNING **: XID collision, trouble ahead Bob Grassucci 04/19/2017 03:05 PM 6 Added by Harry Kao over 7 years ago
RE: (python:5205): Gdk-WARNING **: XID collision, trouble...
move failed no model mag calibration in axis x James Bouwer 01/31/2017 04:37 PM 1 Added by Anchi Cheng almost 8 years ago
RE: move failed no model mag calibration in axis x
Email address format is invalid Harry Kao 12/15/2016 10:25 AM 2 Added by Harry Kao almost 8 years ago
RE: Email address format is invalid
Reloading images ready for processing by target finders such as "Exposure Targeting" node Anchi Cheng 12/21/2016 12:09 PM 0
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